Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN05444680_104413 | Not Available | Positive | 3167398 - 3167703 | 10991.2 |
| Trna-thr | Not Available | Not Available | Positive | 3167771 - 3167846 | Not Available |
| stringent starvation protein b | SAMN05444680_104415 | Not Available | Negative | 3167886 - 3168461 | 20326.0 |
| rna polymerase-associated protein | SAMN05444680_104416 | Not Available | Negative | 3168481 - 3169092 | 23725.9 |
| ubiquinol-cytochrome c reductase cytochrome c1 subunit | SAMN05444680_104417 | Not Available | Negative | 3169184 - 3169939 | 28338.1 |
| ubiquinol-cytochrome c reductase cytochrome b subunit | SAMN05444680_104418 | Not Available | Negative | 3169956 - 3171356 | 52710.1 |
| ubiquinol-cytochrome c reductase iron-sulfur subunit | SAMN05444680_104419 | Not Available | Negative | 3171367 - 3171981 | 21943.2 |
| large conductance mechanosensitive channel | SAMN05444680_104420 | Not Available | Positive | 3172163 - 3172585 | 15383.3 |
| 4-hydroxythreonine-4-phosphate dehydrogenase | SAMN05444680_104421 | Not Available | Negative | 3172607 - 3173644 | 35733.3 |
| dinuclear metal center protein, ybgi/sa1388 family | SAMN05444680_104422 | Not Available | Negative | 3173650 - 3174423 | 27365.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
