Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| paraquat-inducible protein b | SAMN05444680_101251 | Not Available | Positive | 264986 - 266596 | 58866.7 |
| hypothetical protein | SAMN05444680_101252 | Not Available | Positive | 266593 - 267225 | 21952.0 |
| methylated-dna-[protein]-cysteine s-methyltransferase | SAMN05444680_101253 | Not Available | Positive | 267242 - 267784 | 19070.0 |
| mfs transporter, dha1 family, bicyclomycin/chloramphenicol resistance protein | SAMN05444680_101254 | Not Available | Positive | 267967 - 269139 | 40482.8 |
| mfs transporter, dha2 family, multidrug resistance protein | SAMN05444680_101255 | Not Available | Positive | 269144 - 270571 | 48949.2 |
| lysophospholipase, alpha-beta hydrolase superfamily | SAMN05444680_101256 | Not Available | Negative | 270574 - 272028 | 53793.8 |
| drug resistance transporter, emrb/qaca subfamily | SAMN05444680_101257 | Not Available | Positive | 272184 - 273800 | 55297.1 |
| cubico group peptidase, beta-lactamase class c family | SAMN05444680_101258 | Not Available | Positive | 273797 - 275206 | 51196.6 |
| hypothetical protein | SAMN05444680_101259 | Not Available | Positive | 275346 - 277874 | 93102.4 |
| choline dehydrogenase | SAMN05444680_101260 | Not Available | Positive | 277896 - 279767 | 69347.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
