Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iv pilus assembly protein pilc | SAMN05444680_104403 | Not Available | Positive | 3155397 - 3156620 | 44583.9 |
| type 4 prepilin peptidase 1 aspartic peptidase. merops family a24a | SAMN05444680_104404 | Not Available | Positive | 3156620 - 3157462 | 30018.1 |
| dephospho-coa kinase | SAMN05444680_104405 | Not Available | Positive | 3157476 - 3158078 | 21314.8 |
| alginate o-acetyltransferase complex protein algi | SAMN05444680_104406 | Not Available | Positive | 3158157 - 3159650 | 55990.5 |
| hypothetical protein | SAMN05444680_104407 | Not Available | Positive | 3159652 - 3160665 | 37966.4 |
| cell division protein zapd | SAMN05444680_104408 | Not Available | Positive | 3160696 - 3161451 | 28526.4 |
| 8-oxo-dgtpase | SAMN05444680_104409 | Not Available | Negative | 3161808 - 3162242 | 15992.1 |
| hypothetical protein | SAMN05444680_104410 | Not Available | Negative | 3162247 - 3163116 | 32449.5 |
| glutamate n-acetyltransferase | SAMN05444680_104411 | Not Available | Negative | 3163193 - 3164422 | 43124.5 |
| protein translocase subunit seca | SAMN05444680_104412 | Not Available | Negative | 3164445 - 3167222 | 103798.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
