Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prolyl-trna synthetase | SAMN05444680_104393 | Not Available | Negative | 3146042 - 3147790 | 63926.9 |
| putative (di)nucleoside polyphosphate hydrolase | SAMN05444680_104394 | Not Available | Positive | 3147913 - 3148569 | 25940.6 |
| cnp1-like family protein | SAMN05444680_104395 | Not Available | Positive | 3148556 - 3149056 | 18328.6 |
| glutamate 5-kinase | SAMN05444680_104396 | Not Available | Negative | 3149061 - 3150215 | 40690.9 |
| gtp-binding protein | SAMN05444680_104397 | Not Available | Negative | 3150267 - 3151322 | 38128.8 |
| large subunit ribosomal protein l27 | SAMN05444680_104398 | Not Available | Negative | 3151390 - 3151647 | 8787.65 |
| lsu ribosomal protein l21p | SAMN05444680_104399 | Not Available | Negative | 3151660 - 3151971 | 11226.7 |
| octaprenyl-diphosphate synthase | SAMN05444680_104400 | Not Available | Positive | 3152057 - 3153151 | 39100.8 |
| Trna-pro | Not Available | Not Available | Positive | 3153189 - 3153265 | Not Available |
| type iv pilus assembly protein pilb | SAMN05444680_104402 | Not Available | Positive | 3153643 - 3155376 | 62522.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
