Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| small-conductance mechanosensitive channel | SAMN05444680_104383 | Not Available | Positive | 3135830 - 3138250 | 85214.7 |
| hypothetical protein | SAMN05444680_104384 | Not Available | Negative | 3138255 - 3138533 | 9852.14 |
| glutamyl-trna reductase | SAMN05444680_104385 | Not Available | Positive | 3138563 - 3139891 | 48412.4 |
| bacterial peptide chain release factor 1 (brf-1) | SAMN05444680_104386 | Not Available | Positive | 3139982 - 3141070 | 40464.8 |
| [protein release factor]-glutamine n5-methyltransferase | SAMN05444680_104387 | Not Available | Positive | 3141067 - 3141921 | 30527.1 |
| monothiol glutaredoxin | SAMN05444680_104388 | Not Available | Positive | 3141951 - 3142274 | 11907.5 |
| uncharacterized protein, rmlc-like cupin domain | SAMN05444680_104389 | Not Available | Positive | 3142335 - 3142835 | 18100.1 |
| atp-dependent lon protease | SAMN05444680_104390 | Not Available | Positive | 3142934 - 3143926 | 36526.6 |
| hemolysin, contains cbs domains | SAMN05444680_104391 | Not Available | Positive | 3143976 - 3145346 | 50880.7 |
| transglycosylase slt domain-containing protein | SAMN05444680_104392 | Not Available | Negative | 3145324 - 3145983 | 24371.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
