Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase | SAMN05444680_104373 | Not Available | Negative | 3123392 - 3124123 | 26748.4 |
| duf971 family protein | SAMN05444680_104374 | Not Available | Negative | 3124263 - 3124676 | 14794.3 |
| diadenosine tetraphosphate (ap4a) hydrolase | SAMN05444680_104375 | Not Available | Negative | 3124676 - 3125116 | 16331.5 |
| fe-s oxidoreductase | SAMN05444680_104376 | Not Available | Negative | 3125119 - 3129009 | 142762.0 |
| d-3-phosphoglycerate dehydrogenase | SAMN05444680_104377 | Not Available | Negative | 3129223 - 3130452 | 43751.9 |
| carbohydrate abc transporter substrate-binding protein, cut1 family | SAMN05444680_104378 | Not Available | Positive | 3130679 - 3131989 | 47748.6 |
| carbohydrate abc transporter membrane protein 1, cut1 family | SAMN05444680_104379 | Not Available | Positive | 3132057 - 3132938 | 32566.3 |
| carbohydrate abc transporter membrane protein 2, cut1 family | SAMN05444680_104380 | Not Available | Positive | 3132940 - 3133791 | 31243.3 |
| carbohydrate abc transporter atp-binding protein, cut1 family | SAMN05444680_104381 | Not Available | Positive | 3133912 - 3134919 | 36977.3 |
| glycerophosphoryl diester phosphodiesterase | SAMN05444680_104382 | Not Available | Positive | 3135044 - 3135790 | 27167.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
