Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two component transcriptional regulator, luxr family | SAMN05444680_104353 | Not Available | Negative | 3107803 - 3108435 | 23278.2 |
| signal transduction histidine kinase | SAMN05444680_104354 | Not Available | Positive | 3108543 - 3109901 | 50227.8 |
| protein of unknown function | SAMN05444680_104355 | Not Available | Positive | 3110070 - 3110234 | 5604.37 |
| membrane-anchored ribosome-binding protein, inhibits growth in stationary phase, elab/yqjd/duf883 family | SAMN05444680_104356 | Not Available | Positive | 3110288 - 3110662 | 13246.5 |
| putative holin-x, holin superfamily iii | SAMN05444680_104357 | Not Available | Positive | 3110718 - 3111098 | 13554.8 |
| hypothetical protein | SAMN05444680_104358 | Not Available | Positive | 3111061 - 3111537 | 17453.0 |
| bacterioferritin | SAMN05444680_104359 | Not Available | Positive | 3111534 - 3112082 | 20468.1 |
| uncharacterized conserved protein yjbj, upf0337 family | SAMN05444680_104360 | Not Available | Negative | 3112144 - 3112341 | 6959.19 |
| protein of unknown function | SAMN05444680_104361 | Not Available | Negative | 3112466 - 3113290 | 29561.5 |
| sensors of blue-light using fad | SAMN05444680_104362 | Not Available | Negative | 3113340 - 3113762 | 15345.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
