Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_104333 | Not Available | Negative | 3090597 - 3091574 | 34203.7 |
| hydroxymethylglutaryl-coa lyase | SAMN05444680_104334 | Not Available | Negative | 3091615 - 3092538 | 32463.1 |
| crotonobetainyl-coa:carnitine coa-transferase caib | SAMN05444680_104335 | Not Available | Negative | 3092547 - 3093758 | 43440.2 |
| transcriptional regulator, propionate catabolism operon regulatory protein | SAMN05444680_104336 | Not Available | Positive | 3093907 - 3095835 | 71817.3 |
| beta-barrel assembly machine subunit bame | SAMN05444680_104337 | Not Available | Negative | 3095832 - 3096335 | 18783.4 |
| hypothetical protein | SAMN05444680_104338 | Not Available | Negative | 3096381 - 3097052 | 22938.7 |
| protein of unknown function | SAMN05444680_104339 | Not Available | Positive | 3097157 - 3097363 | 7982.41 |
| condensin subunit scpa | SAMN05444680_104340 | Not Available | Positive | 3097364 - 3098287 | 34540.9 |
| 7-carboxy-7-deazaguanine synthase, cx14cxxc type | SAMN05444680_104341 | Not Available | Positive | 3098370 - 3099008 | 23166.7 |
| 6-pyruvoyltetrahydropterin/6- carboxytetrahydropterin synthase | SAMN05444680_104342 | Not Available | Positive | 3099008 - 3099406 | 14787.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
