Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitrate/nitrite transporter nark | SAMN05444680_104323 | Not Available | Negative | 3078524 - 3080218 | 59619.9 |
| dna-binding transcriptional regulator, lysr family | SAMN05444680_104324 | Not Available | Negative | 3080386 - 3081312 | 33933.4 |
| atp-binding protein involved in chromosome partitioning | SAMN05444680_104325 | Not Available | Negative | 3081463 - 3082554 | 38423.7 |
| lysr family transcriptional regulator, cys regulon transcriptional activator | SAMN05444680_104326 | Not Available | Positive | 3082700 - 3083653 | 34900.2 |
| nte family protein | SAMN05444680_104327 | Not Available | Positive | 3083687 - 3084958 | 45772.0 |
| ribosomal-protein-alanine n-acetyltransferase | SAMN05444680_104328 | Not Available | Negative | 3084933 - 3085400 | 17142.4 |
| methionyl-trna synthetase | SAMN05444680_104329 | Not Available | Positive | 3085531 - 3087609 | 76484.5 |
| hypothetical protein | SAMN05444680_104330 | Not Available | Positive | 3087609 - 3087827 | 6592.1 |
| sulfate permease, sulp family | SAMN05444680_104331 | Not Available | Positive | 3087864 - 3089546 | 59635.0 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_104332 | Not Available | Negative | 3089553 - 3090551 | 34468.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
