Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate dehydrogenase region tat target | SAMN05444680_104313 | Not Available | Negative | 3067390 - 3067617 | 7521.8 |
| chaperone tord involved in molybdoenzyme tora maturation | SAMN05444680_104314 | Not Available | Negative | 3067737 - 3068354 | 22484.6 |
| formate hydrogenlyase subunit 6/nadh:ubiquinone oxidoreductase subunit (chain i) | SAMN05444680_104315 | Not Available | Negative | 3068351 - 3070429 | 73856.8 |
| protein of unknown function | SAMN05444680_104316 | Not Available | Negative | 3070389 - 3071006 | 22389.7 |
| protein of unknown function | SAMN05444680_104317 | Not Available | Negative | 3070999 - 3071586 | 22418.3 |
| hypothetical protein | SAMN05444680_104318 | Not Available | Positive | 3071789 - 3072313 | 18987.7 |
| fha domain-containing protein | SAMN05444680_104319 | Not Available | Negative | 3072314 - 3072679 | 13634.5 |
| transcriptional regulator, lysr family | SAMN05444680_104320 | Not Available | Negative | 3072874 - 3073776 | 33811.8 |
| nad-dependent formate dehydrogenase catalytic subunit /nad-dependent formate dehydrogenase iron-sulfur protein | SAMN05444680_104321 | Not Available | Negative | 3073758 - 3076649 | 104325.0 |
| nad-dependent formate dehydrogenase flavoprotein subunit | SAMN05444680_104322 | Not Available | Negative | 3076646 - 3078475 | 66590.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
