Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ubiquinone/menaquinone biosynthesis c-methylase ubie | SAMN05444680_101241 | Not Available | Negative | 254858 - 255673 | 29402.0 |
| methyltransferase, tigr00027 family | SAMN05444680_101242 | Not Available | Negative | 255730 - 256590 | 31639.9 |
| putative ig domain-containing protein | SAMN05444680_101243 | Not Available | Negative | 256647 - 258749 | 71079.8 |
| short-chain dehydrogenase | SAMN05444680_101244 | Not Available | Positive | 258965 - 259870 | 32058.6 |
| uncharacterized conserved protein ybaa, duf1428 family | SAMN05444680_101245 | Not Available | Positive | 259996 - 260355 | 13529.1 |
| predicted oxidoreductase | SAMN05444680_101246 | Not Available | Negative | 260360 - 261391 | 37230.2 |
| mfs transporter, dha1 family, inner membrane transport protein | SAMN05444680_101247 | Not Available | Negative | 261430 - 262611 | 40105.4 |
| transcriptional regulator, lysr family | SAMN05444680_101248 | Not Available | Positive | 262704 - 263624 | 33833.9 |
| paraquat-inducible protein a | SAMN05444680_101249 | Not Available | Positive | 263621 - 264244 | 22555.2 |
| paraquat-inducible protein a | SAMN05444680_101250 | Not Available | Positive | 264303 - 264989 | 24919.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
