Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Tail protein | SAMN05444680_102674 | Not Available | Negative | 1717488 - 1717907 | 15145.8 |
| Tail tape measure protein | SAMN05444680_102675 | Not Available | Negative | 1717926 - 1720442 | 87442.2 |
| hypothetical protein | SAMN05444680_102676 | Not Available | Negative | 1720464 - 1720706 | 8654.62 |
| Gpe familygtail protein | SAMN05444680_102677 | Not Available | Negative | 1720722 - 1720838 | 4572.2 |
| Tail protein | SAMN05444680_102678 | Not Available | Negative | 1720847 - 1721185 | 11670.1 |
| Tail core protein | SAMN05444680_102679 | Not Available | Negative | 1721213 - 1721722 | 18509.3 |
| Tail sheath protein | SAMN05444680_102680 | Not Available | Negative | 1721758 - 1722936 | 42426.4 |
| hypothetical protein | SAMN05444680_102681 | Not Available | Negative | 1722961 - 1723587 | 22291.5 |
| Putative phage-related tail fiber protein | SAMN05444680_102682 | Not Available | Negative | 1723605 - 1724678 | 38596.6 |
| Gp25, tail fiber | SAMN05444680_102683 | Not Available | Negative | 1724693 - 1725271 | 21064.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
