Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-threonine ammonia-lyase | SAMN05444680_104293 | Not Available | Negative | 3047163 - 3048125 | 33342.1 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | SAMN05444680_104294 | Not Available | Negative | 3048122 - 3049087 | 34774.9 |
| fkbp-type peptidyl-prolyl cis-trans isomerase slpa | SAMN05444680_104295 | Not Available | Negative | 3049084 - 3049542 | 16116.0 |
| dna repair protein radc | SAMN05444680_104296 | Not Available | Positive | 3049608 - 3050285 | 24456.0 |
| two component transcriptional regulator, luxr family | SAMN05444680_104297 | Not Available | Positive | 3050451 - 3051185 | 25887.3 |
| hypothetical protein | SAMN05444680_104298 | Not Available | Positive | 3051452 - 3053041 | 58521.3 |
| dna-nicking endonuclease, smr domain | SAMN05444680_104299 | Not Available | Positive | 3053065 - 3053727 | 24317.3 |
| hemoglobin | SAMN05444680_104300 | Not Available | Negative | 3053739 - 3054158 | 16172.3 |
| polar amino acid transport system atp-binding protein | SAMN05444680_104301 | Not Available | Positive | 3054198 - 3055226 | 37882.2 |
| penicillin-binding protein 6. serine peptidase. merops family s11 | SAMN05444680_104302 | Not Available | Positive | 3055332 - 3056579 | 43766.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
