Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444680_104283 | Not Available | Positive | 3038175 - 3039056 | 31949.7 |
| threonine/homoserine efflux transporter rhta | SAMN05444680_104284 | Not Available | Positive | 3039053 - 3039994 | 33722.2 |
| trna threonylcarbamoyl adenosine modification protein, sua5/ycio/yrdc/ywlc family | SAMN05444680_104285 | Not Available | Positive | 3040061 - 3040696 | 23319.3 |
| zn-dependent protease (includes spoivfb) | SAMN05444680_104286 | Not Available | Positive | 3040738 - 3041409 | 24527.8 |
| tryptophanyl-trna synthetase | SAMN05444680_104287 | Not Available | Positive | 3041420 - 3042736 | 48131.2 |
| two component transcriptional regulator, luxr family | SAMN05444680_104288 | Not Available | Positive | 3042807 - 3043403 | 21683.2 |
| signal transduction histidine kinase | SAMN05444680_104289 | Not Available | Negative | 3043516 - 3044952 | 53261.8 |
| Trna-ser | Not Available | Not Available | Positive | 3045210 - 3045300 | Not Available |
| seryl-trna synthetase | SAMN05444680_104291 | Not Available | Negative | 3045349 - 3046680 | 48577.1 |
| phnb protein | SAMN05444680_104292 | Not Available | Positive | 3046740 - 3047150 | 14795.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
