Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc-type nitrate/sulfonate/bicarbonate transport system, substrate-binding protein | SAMN05444680_104263 | Not Available | Positive | 3018491 - 3019519 | 36905.0 |
| trna(arg) a34 adenosine deaminase tada | SAMN05444680_104264 | Not Available | Positive | 3019516 - 3020037 | 18756.2 |
| molybdate transport system regulatory protein | SAMN05444680_104265 | Not Available | Positive | 3020142 - 3020489 | 12150.8 |
| molybdate transport system permease protein | SAMN05444680_104266 | Not Available | Positive | 3020941 - 3021618 | 23941.8 |
| molybdate transport system substrate-binding protein | SAMN05444680_104267 | Not Available | Positive | 3021637 - 3022410 | 27254.9 |
| molybdate transport system atp-binding protein | SAMN05444680_104268 | Not Available | Positive | 3022407 - 3023186 | 28860.8 |
| urease accessory protein | SAMN05444680_104269 | Not Available | Positive | 3023335 - 3024165 | 30453.7 |
| predicted arabinose efflux permease, mfs family | SAMN05444680_104270 | Not Available | Positive | 3024188 - 3025633 | 51306.1 |
| membrane protein deda, snare-associated domain | SAMN05444680_104271 | Not Available | Negative | 3025635 - 3026579 | 33661.0 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05444680_104272 | Not Available | Positive | 3026787 - 3027380 | 22174.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
