Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-hydroxy-3-oxopropionate reductase | SAMN05444680_104253 | Not Available | Positive | 3008995 - 3009894 | 30774.7 |
| malate dehydrogenase (oxaloacetate-decarboxylating)(nadp+) | SAMN05444680_104254 | Not Available | Positive | 3010123 - 3012426 | 82478.7 |
| nitt/taut family transport system substrate-binding protein | SAMN05444680_104255 | Not Available | Positive | 3012615 - 3013643 | 36308.8 |
| nitt/taut family transport system atp-binding protein | SAMN05444680_104256 | Not Available | Positive | 3013643 - 3014485 | 31844.7 |
| nitt/taut family transport system permease protein | SAMN05444680_104257 | Not Available | Positive | 3014490 - 3015260 | 28151.2 |
| cytidine and deoxycytidylate deaminase zinc-binding region | SAMN05444680_104258 | Not Available | Positive | 3015313 - 3015735 | 15092.0 |
| conserved hypothetical protein | SAMN05444680_104259 | Not Available | Positive | 3015804 - 3016118 | 11323.7 |
| hypothetical protein | SAMN05444680_104260 | Not Available | Negative | 3016139 - 3016564 | 14461.4 |
| putative redox protein | SAMN05444680_104261 | Not Available | Negative | 3016730 - 3017128 | 14574.4 |
| phenylpropionate dioxygenase, large terminal subunit | SAMN05444680_104262 | Not Available | Negative | 3017166 - 3018209 | 39727.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
