Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gaf domain-containing protein | SAMN05444680_104243 | Not Available | Negative | 2989444 - 2993256 | 138836.0 |
| dyp-type peroxidase family | SAMN05444680_104244 | Not Available | Positive | 2993468 - 2997112 | 132642.0 |
| aaa atpase domain-containing protein | SAMN05444680_104245 | Not Available | Negative | 2997072 - 3000005 | 105553.0 |
| aerobic c4-dicarboxylate transport protein | SAMN05444680_104246 | Not Available | Positive | 3000247 - 3001593 | 46808.7 |
| dna-binding transcriptional regulator, gntr family | SAMN05444680_104247 | Not Available | Positive | 3001602 - 3002300 | 25206.3 |
| predicted purr-regulated permease perm | SAMN05444680_104248 | Not Available | Positive | 3002436 - 3003515 | 38672.6 |
| peptidoglycan synthetase ftsi | SAMN05444680_104249 | Not Available | Positive | 3003558 - 3005288 | 62429.8 |
| dna-binding transcriptional regulator, lysr family | SAMN05444680_104250 | Not Available | Negative | 3005349 - 3006251 | 32799.6 |
| tartronate-semialdehyde synthase | SAMN05444680_104251 | Not Available | Positive | 3006366 - 3008159 | 65056.6 |
| hydroxypyruvate isomerase | SAMN05444680_104252 | Not Available | Positive | 3008178 - 3008957 | 28623.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
