Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444680_104233 | Not Available | Negative | 2979479 - 2981368 | 68798.9 |
| nicotinamidase-related amidase | SAMN05444680_104234 | Not Available | Negative | 2981394 - 2982065 | 23770.5 |
| hypothetical protein | SAMN05444680_104235 | Not Available | Negative | 2982136 - 2982855 | 26691.2 |
| dna-binding transcriptional regulator, lysr family | SAMN05444680_104236 | Not Available | Positive | 2983017 - 2983919 | 32832.9 |
| serine phosphatase rsbu, regulator of sigma subunit | SAMN05444680_104237 | Not Available | Negative | 2984097 - 2985311 | 44298.4 |
| hypothetical protein | SAMN05444680_104238 | Not Available | Negative | 2985314 - 2985808 | 18030.9 |
| outer membrane protein ompa | SAMN05444680_104239 | Not Available | Negative | 2985824 - 2987683 | 67802.4 |
| hypothetical protein | SAMN05444680_104240 | Not Available | Negative | 2987742 - 2988365 | 23315.5 |
| sigma-b regulation protein rsbu (phosphoserine phosphatase) | SAMN05444680_104241 | Not Available | Negative | 2988449 - 2988886 | 15939.8 |
| anti-anti-sigma factor | SAMN05444680_104242 | Not Available | Negative | 2988886 - 2989245 | 12499.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
