Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN05444680_104223 | Not Available | Negative | 2969385 - 2969990 | 21954.5 |
| hypothetical protein | SAMN05444680_104224 | Not Available | Positive | 2970102 - 2970275 | 5781.01 |
| hypothetical protein | SAMN05444680_104225 | Not Available | Negative | 2970327 - 2971010 | 24087.2 |
| selenium-binding protein 1 | SAMN05444680_104226 | Not Available | Negative | 2971015 - 2972418 | 51666.0 |
| nucleobase:cation symporter-2, ncs2 family | SAMN05444680_104227 | Not Available | Positive | 2972672 - 2974153 | 51147.7 |
| aldo/keto reductase | SAMN05444680_104228 | Not Available | Negative | 2974154 - 2975002 | 30469.6 |
| mechanosensitive ion channel | SAMN05444680_104229 | Not Available | Negative | 2975012 - 2976640 | 60322.3 |
| hypothetical protein | SAMN05444680_104230 | Not Available | Positive | 2976706 - 2977428 | 25749.1 |
| predicted arabinose efflux permease, mfs family | SAMN05444680_104231 | Not Available | Negative | 2977425 - 2979077 | 57812.3 |
| uncharacterized membrane protein ypha, doxx/surf4 family | SAMN05444680_104232 | Not Available | Negative | 2979067 - 2979468 | 14279.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
