Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carboxypeptidase pm20d1 | SAMN05444680_101231 | Not Available | Positive | 244782 - 246251 | 52295.1 |
| acetyl-coa c-acetyltransferase | SAMN05444680_101232 | Not Available | Positive | 246283 - 247458 | 40726.2 |
| butyryl-coa dehydrogenase | SAMN05444680_101233 | Not Available | Positive | 247581 - 249413 | 66358.1 |
| hypothetical protein | SAMN05444680_101234 | Not Available | Positive | 249413 - 249619 | 7280.18 |
| stress responsive a/b barrel domain | SAMN05444680_101235 | Not Available | Positive | 249635 - 249916 | 10279.5 |
| gluconate 5-dehydrogenase | SAMN05444680_101236 | Not Available | Positive | 249942 - 250736 | 27889.5 |
| uncharacterized domain 1-containing protein | SAMN05444680_101237 | Not Available | Positive | 250717 - 251199 | 17595.1 |
| hypothetical protein | SAMN05444680_101238 | Not Available | Positive | 251211 - 252227 | 36187.9 |
| putative acyl-coa dehydrogenase | SAMN05444680_101239 | Not Available | Positive | 252248 - 253888 | 58721.4 |
| glutathione s-transferase | SAMN05444680_101240 | Not Available | Positive | 253913 - 254851 | 34497.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
