Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trap-type mannitol/chloroaromatic compound transport system, substrate-binding protein | SAMN05444680_104183 | Not Available | Negative | 2931772 - 2932851 | 39637.2 |
| 1-deoxy-d-xylulose-5-phosphate synthase | SAMN05444680_104184 | Not Available | Negative | 2932939 - 2934825 | 67323.1 |
| farnesyl diphosphate synthase | SAMN05444680_104185 | Not Available | Negative | 2934841 - 2935761 | 31790.2 |
| exodeoxyribonuclease vii small subunit | SAMN05444680_104186 | Not Available | Negative | 2935758 - 2936024 | 9481.24 |
| phenylpropionate dioxygenase, large terminal subunit | SAMN05444680_104187 | Not Available | Positive | 2936216 - 2937346 | 42946.6 |
| hypothetical protein | SAMN05444680_104188 | Not Available | Positive | 2937597 - 2938529 | 32758.7 |
| thiosulfate/3-mercaptopyruvate sulfurtransferase | SAMN05444680_104189 | Not Available | Positive | 2938540 - 2939445 | 32156.2 |
| protein of unknown function | SAMN05444680_104190 | Not Available | Positive | 2939442 - 2939987 | 19397.5 |
| putative abc transport system atp-binding protein | SAMN05444680_104191 | Not Available | Positive | 2939995 - 2940699 | 25418.6 |
| putative abc transport system permease protein | SAMN05444680_104192 | Not Available | Positive | 2940696 - 2941955 | 44845.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
