Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative molybdopterin biosynthesis protein | SAMN05444680_104173 | Not Available | Positive | 2921810 - 2922910 | 39918.9 |
| ergothioneine biosynthesis protein egtb | SAMN05444680_104174 | Not Available | Negative | 2922929 - 2924125 | 44650.7 |
| amino acid/amide abc transporter substrate-binding protein, haat family | SAMN05444680_104175 | Not Available | Positive | 2924145 - 2925518 | 48015.3 |
| amino acid/amide abc transporter membrane protein 1, haat family | SAMN05444680_104176 | Not Available | Positive | 2925673 - 2926554 | 30817.3 |
| amino acid/amide abc transporter membrane protein 2, haat family | SAMN05444680_104177 | Not Available | Positive | 2926551 - 2927417 | 30319.0 |
| amino acid/amide abc transporter atp-binding protein 1, haat family | SAMN05444680_104178 | Not Available | Positive | 2927414 - 2928214 | 29319.6 |
| amino acid/amide abc transporter atp-binding protein 2, haat family | SAMN05444680_104179 | Not Available | Positive | 2928211 - 2928933 | 25586.3 |
| trap-type mannitol/chloroaromatic compound transport system, small permease component | SAMN05444680_104180 | Not Available | Positive | 2929033 - 2929629 | 22116.6 |
| trap transporter, dctm subunit | SAMN05444680_104181 | Not Available | Positive | 2929691 - 2931220 | 54905.8 |
| hypothetical protein | SAMN05444680_104182 | Not Available | Positive | 2931217 - 2931690 | 17718.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
