Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbon-monoxide dehydrogenase small subunit | SAMN05444680_104163 | Not Available | Negative | 2913319 - 2913810 | 17171.8 |
| regulatory protein, fis family | SAMN05444680_104164 | Not Available | Positive | 2914004 - 2915125 | 39778.7 |
| amino acid/amide abc transporter substrate-binding protein, haat family | SAMN05444680_104165 | Not Available | Positive | 2915276 - 2916436 | 40019.1 |
| thioredoxin 1 | SAMN05444680_104166 | Not Available | Positive | 2916550 - 2916828 | 10044.2 |
| snoal-like domain-containing protein | SAMN05444680_104167 | Not Available | Negative | 2916829 - 2917206 | 13767.2 |
| d-amino-acid dehydrogenase | SAMN05444680_104168 | Not Available | Negative | 2917296 - 2918612 | 47433.2 |
| transcriptional regulator, asnc family | SAMN05444680_104169 | Not Available | Positive | 2918730 - 2919197 | 17699.6 |
| tungstate transport system substrate-binding protein | SAMN05444680_104170 | Not Available | Negative | 2919303 - 2920220 | 32256.8 |
| amino acid abc transporter atp-binding protein, paat family | SAMN05444680_104171 | Not Available | Negative | 2920217 - 2920924 | 25682.2 |
| tungstate transport system permease protein | SAMN05444680_104172 | Not Available | Negative | 2920921 - 2921670 | 25824.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
