Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chorismate mutase | SAMN05444680_104113 | Not Available | Positive | 2864786 - 2865901 | 40412.1 |
| prephenate dehydrogenase | SAMN05444680_104114 | Not Available | Positive | 2865920 - 2866798 | 31116.6 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | SAMN05444680_104115 | Not Available | Positive | 2866939 - 2868933 | 71198.6 |
| ssu ribosomal protein s1p | SAMN05444680_104116 | Not Available | Positive | 2869093 - 2870781 | 61833.8 |
| integration host factor subunit beta | SAMN05444680_104117 | Not Available | Positive | 2870850 - 2871167 | 11847.2 |
| uncharacterized integral membrane protein | SAMN05444680_104118 | Not Available | Positive | 2871236 - 2871556 | 11285.9 |
| lipopolysaccharide biosynthesis regulator ycim, contains six tpr domains and a predicted metal-binding c-terminal domain | SAMN05444680_104119 | Not Available | Positive | 2871546 - 2872730 | 44123.1 |
| competence protein comea | SAMN05444680_104120 | Not Available | Positive | 2872846 - 2873193 | 12299.8 |
| trap-type c4-dicarboxylate transport system, substrate-binding protein | SAMN05444680_104121 | Not Available | Positive | 2873370 - 2874338 | 34771.7 |
| trap-type mannitol/chloroaromatic compound transport system, small permease component | SAMN05444680_104122 | Not Available | Positive | 2874342 - 2874938 | 21379.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
