Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| exodeoxyribonuclease-3 | SAMN05444680_10493 | Not Available | Positive | 2844381 - 2845160 | 29552.4 |
| hypothetical protein | SAMN05444680_10494 | Not Available | Positive | 2845157 - 2845654 | 17684.2 |
| nitrogen metabolism transcriptional regulator, ntrc, fis family | SAMN05444680_10495 | Not Available | Negative | 2845661 - 2847205 | 55838.9 |
| signal transduction histidine kinase, nitrogen specific, ntrb | SAMN05444680_10496 | Not Available | Negative | 2847228 - 2848304 | 39924.1 |
| hypothetical protein | SAMN05444680_10497 | Not Available | Negative | 2848304 - 2848816 | 18348.4 |
| l-glutamine synthetase | SAMN05444680_10498 | Not Available | Negative | 2849022 - 2850437 | 52476.3 |
| predicted nucleotide-utilizing enzyme | SAMN05444680_10499 | Not Available | Negative | 2850585 - 2851385 | 28959.0 |
| etoposide-induced protein 2.4 (ei24) | SAMN05444680_104100 | Not Available | Negative | 2851382 - 2852254 | 31666.7 |
| sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily | SAMN05444680_104101 | Not Available | Negative | 2852300 - 2853271 | 36875.6 |
| peptidoglycan/xylan/chitin deacetylase, pgda/cda1 family | SAMN05444680_104102 | Not Available | Negative | 2853303 - 2854097 | 29264.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
