Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pimeloyl-acp methyl ester carboxylesterase | SAMN05444680_10483 | Not Available | Positive | 2837360 - 2838166 | 28038.8 |
| hypothetical protein | SAMN05444680_10484 | Not Available | Negative | 2838168 - 2838833 | 24335.8 |
| thioredoxin | SAMN05444680_10485 | Not Available | Negative | 2838846 - 2839229 | 14136.7 |
| pp_02726 | SAMN05444680_10486 | Not Available | Negative | 2839276 - 2840493 | Not Available |
| uncharacterized membrane protein | SAMN05444680_10487 | Not Available | Positive | 2840563 - 2840964 | 14745.5 |
| fad/fmn-containing dehydrogenase | SAMN05444680_10488 | Not Available | Positive | 2840961 - 2842382 | 50463.2 |
| antitoxin ccda | SAMN05444680_10489 | Not Available | Positive | 2842430 - 2842669 | 9174.0 |
| toxin ccdb | SAMN05444680_10490 | Not Available | Positive | 2842677 - 2842991 | 11544.9 |
| thymidylate synthase | SAMN05444680_10491 | Not Available | Positive | 2842993 - 2843826 | 31756.6 |
| dihydrofolate reductase | SAMN05444680_10492 | Not Available | Positive | 2843830 - 2844327 | 18193.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
