Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized conserved protein, duf849 family | SAMN05444680_10463 | Not Available | Negative | 2812292 - 2813185 | 32499.3 |
| competence protein coia-like family protein | SAMN05444680_10464 | Not Available | Positive | 2813466 - 2814872 | 53254.8 |
| hypothetical protein | SAMN05444680_10465 | Not Available | Positive | 2815124 - 2816212 | 41294.9 |
| alkylated dna repair dioxygenase alkb | SAMN05444680_10466 | Not Available | Negative | 2817321 - 2817896 | 21712.1 |
| protein imua | SAMN05444680_10467 | Not Available | Positive | 2817988 - 2818791 | 28744.9 |
| hypothetical protein | SAMN05444680_10468 | Not Available | Positive | 2818816 - 2819448 | 23094.2 |
| protein imub | SAMN05444680_10469 | Not Available | Positive | 2819462 - 2820049 | 22372.9 |
| error-prone dna polymerase | SAMN05444680_10470 | Not Available | Positive | 2820046 - 2823159 | 116620.0 |
| hypothetical protein | SAMN05444680_10471 | Not Available | Negative | 2823701 - 2826001 | 85445.6 |
| hypothetical protein | SAMN05444680_10472 | Not Available | Negative | 2825998 - 2827980 | 74408.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
