Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid/amide abc transporter atp-binding protein 2, haat family | SAMN05444680_10453 | Not Available | Negative | 2801114 - 2801848 | 26192.9 |
| amino acid/amide abc transporter membrane protein 2, haat family /amino acid/amide abc transporter atp-binding protein 1, haat family | SAMN05444680_10454 | Not Available | Negative | 2801845 - 2803623 | 62370.4 |
| amino acid/amide abc transporter membrane protein 1, haat family | SAMN05444680_10455 | Not Available | Negative | 2803620 - 2804660 | 36458.5 |
| cupin domain-containing protein | SAMN05444680_10456 | Not Available | Negative | 2804734 - 2805300 | 20225.0 |
| alcohol dehydrogenase | SAMN05444680_10457 | Not Available | Negative | 2805357 - 2806469 | 39407.8 |
| amino acid/amide abc transporter substrate-binding protein, haat family | SAMN05444680_10458 | Not Available | Negative | 2806514 - 2807659 | 40017.4 |
| butyryl-coa dehydrogenase/hypothetical protein | SAMN05444680_10459 | Not Available | Negative | 2807710 - 2808858 | 41280.2 |
| acyl-coa synthetase (amp-forming)/amp-acid ligase ii | SAMN05444680_10460 | Not Available | Negative | 2808869 - 2810431 | 56293.9 |
| enoyl-coa hydratase/carnithine racemase | SAMN05444680_10461 | Not Available | Negative | 2810428 - 2811234 | 29035.2 |
| 3-hydroxyacyl-coa dehydrogenase | SAMN05444680_10462 | Not Available | Negative | 2811246 - 2812226 | 34956.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
