Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid/amide abc transporter atp-binding protein 1, haat family | SAMN05444680_10443 | Not Available | Negative | 2787431 - 2788219 | 28441.3 |
| amino acid/amide abc transporter membrane protein 2, haat family | SAMN05444680_10444 | Not Available | Negative | 2788216 - 2789091 | 30256.9 |
| amino acid/amide abc transporter membrane protein 1, haat family | SAMN05444680_10445 | Not Available | Negative | 2789259 - 2790179 | 31918.3 |
| amino acid/amide abc transporter substrate-binding protein, haat family | SAMN05444680_10446 | Not Available | Negative | 2790210 - 2791400 | 41603.0 |
| transcriptional regulator, padr family | SAMN05444680_10447 | Not Available | Negative | 2791465 - 2792148 | 25825.4 |
| n-methylhydantoinase b | SAMN05444680_10448 | Not Available | Negative | 2792177 - 2794345 | 77045.8 |
| n-methylhydantoinase a | SAMN05444680_10449 | Not Available | Negative | 2794354 - 2796462 | 74103.6 |
| sir2-like domain-containing protein | SAMN05444680_10450 | Not Available | Positive | 2796730 - 2798499 | 64814.3 |
| hypothetical protein | SAMN05444680_10451 | Not Available | Positive | 2798496 - 2799911 | 53183.7 |
| reverse transcriptase (rna-dependent dna polymerase) | SAMN05444680_10452 | Not Available | Negative | 2799927 - 2800763 | 30952.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
