Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fumarylacetoacetate hydrolase | SAMN05444680_10423 | Not Available | Negative | 2763017 - 2764288 | 45837.2 |
| homogentisate 1,2-dioxygenase | SAMN05444680_10424 | Not Available | Negative | 2764305 - 2765615 | 48354.2 |
| glyoxylase, beta-lactamase superfamily ii | SAMN05444680_10425 | Not Available | Negative | 2765742 - 2766701 | 35396.1 |
| amino acid/amide abc transporter atp-binding protein 2, haat family | SAMN05444680_10426 | Not Available | Negative | 2766740 - 2767450 | 25429.2 |
| amino acid/amide abc transporter membrane protein 2, haat family /amino acid/amide abc transporter atp-binding protein 1, haat family | SAMN05444680_10427 | Not Available | Negative | 2767461 - 2769251 | 63768.8 |
| amino acid/amide abc transporter membrane protein 1, haat family | SAMN05444680_10428 | Not Available | Negative | 2769248 - 2770171 | 31423.8 |
| amino acid/amide abc transporter substrate-binding protein, haat family | SAMN05444680_10429 | Not Available | Negative | 2770231 - 2771427 | 42604.2 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05444680_10430 | Not Available | Negative | 2771499 - 2772275 | 26676.4 |
| succinate dehydrogenase/fumarate reductase, flavoprotein subunit | SAMN05444680_10431 | Not Available | Negative | 2772305 - 2774062 | 63224.7 |
| transcriptional regulator, iclr family | SAMN05444680_10432 | Not Available | Positive | 2774197 - 2775009 | 28492.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
