Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionine aminopeptidase, type i | SAMN05444680_101211 | Not Available | Negative | 220065 - 220889 | 29749.7 |
| phosphoribosylformylglycinamidine synthase | SAMN05444680_101212 | Not Available | Positive | 221021 - 225130 | 146838.0 |
| hypothetical protein | SAMN05444680_101213 | Not Available | Negative | 225197 - 225289 | 3387.95 |
| major type 1 subunit fimbrin (pilin) | SAMN05444680_101214 | Not Available | Positive | 225529 - 226053 | 17563.6 |
| fimbrial chaperone protein | SAMN05444680_101215 | Not Available | Positive | 226201 - 226944 | 27021.3 |
| outer membrane usher protein | SAMN05444680_101216 | Not Available | Positive | 226965 - 229580 | 91362.6 |
| fimbrial protein | SAMN05444680_101217 | Not Available | Positive | 229591 - 230982 | 48651.2 |
| p pilus assembly protein, chaperone papd | SAMN05444680_101218 | Not Available | Positive | 230997 - 231749 | 27516.1 |
| peptidyl-prolyl cis-trans isomerase c | SAMN05444680_101219 | Not Available | Negative | 231808 - 232593 | 29036.8 |
| bola protein | SAMN05444680_101220 | Not Available | Negative | 232714 - 232977 | 9601.55 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
