Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444680_1043 | Not Available | Positive | 2742443 - 2743384 | 34662.0 |
| maleylpyruvate isomerase | SAMN05444680_1044 | Not Available | Negative | 2744727 - 2745365 | 23972.8 |
| hypothetical protein | SAMN05444680_1045 | Not Available | Negative | 2745389 - 2745559 | 6213.66 |
| acyl dehydratase | SAMN05444680_1046 | Not Available | Negative | 2745571 - 2746029 | 16787.9 |
| fumarylpyruvate hydrolase | SAMN05444680_1047 | Not Available | Negative | 2746086 - 2746784 | 24978.9 |
| gentisate 1,2-dioxygenase | SAMN05444680_1048 | Not Available | Negative | 2746781 - 2747836 | 38020.0 |
| 2-polyprenyl-6-methoxyphenol hydroxylase | SAMN05444680_1049 | Not Available | Negative | 2747833 - 2748990 | 43432.7 |
| acetyltransferase | SAMN05444680_10410 | Not Available | Negative | 2749017 - 2751104 | 72160.2 |
| lysr family transcriptional regulator, nitrogen assimilation regulatory protein | SAMN05444680_10411 | Not Available | Positive | 2751307 - 2752242 | 33812.2 |
| uncharacterized membrane protein yccc | SAMN05444680_10412 | Not Available | Negative | 2752274 - 2754178 | 67419.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
