Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nudix n-terminal | SAMN05444680_103704 | Not Available | Positive | 2731136 - 2731687 | 20631.4 |
| tusa-related sulfurtransferase | SAMN05444680_103705 | Not Available | Positive | 2731710 - 2731937 | 8433.16 |
| utp--glucose-1-phosphate uridylyltransferase | SAMN05444680_103706 | Not Available | Negative | 2731960 - 2732844 | 31881.7 |
| valyl-trna synthetase | SAMN05444680_103707 | Not Available | Negative | 2732946 - 2735816 | 107278.0 |
| hypothetical protein | SAMN05444680_103708 | Not Available | Positive | 2735943 - 2736749 | 29587.4 |
| prolyl 4-hydroxylase | SAMN05444680_103709 | Not Available | Positive | 2736746 - 2737582 | 30495.2 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05444680_103710 | Not Available | Positive | 2737601 - 2738494 | 31557.4 |
| 7-cyano-7-deazaguanine reductase | SAMN05444680_103711 | Not Available | Positive | 2738491 - 2739348 | 32032.7 |
| dna repair photolyase | SAMN05444680_1041 | Not Available | Negative | 2739886 - 2740938 | 38611.2 |
| putative sos response-associated peptidase yedk | SAMN05444680_1042 | Not Available | Positive | 2741057 - 2741758 | 26271.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
