Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative atpase | SAMN05444680_103694 | Not Available | Positive | 2721761 - 2723050 | 47494.9 |
| amino acid/amide abc transporter membrane protein 1, haat family | SAMN05444680_103695 | Not Available | Positive | 2723300 - 2724229 | 32268.0 |
| amino acid/amide abc transporter membrane protein 2, haat family | SAMN05444680_103696 | Not Available | Positive | 2724240 - 2725421 | 41713.4 |
| amino acid/amide abc transporter atp-binding protein 1, haat family | SAMN05444680_103697 | Not Available | Positive | 2725439 - 2726209 | 27873.8 |
| amino acid/amide abc transporter atp-binding protein 2, haat family | SAMN05444680_103698 | Not Available | Positive | 2726211 - 2726927 | 25631.6 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_103699 | Not Available | Negative | 2727032 - 2728006 | 33643.7 |
| cdp-4-dehydro-6-deoxyglucose reductase | SAMN05444680_103700 | Not Available | Negative | 2728041 - 2729105 | 38922.6 |
| nucleoside-diphosphate-sugar epimerase | SAMN05444680_103701 | Not Available | Positive | 2729142 - 2730071 | 34271.5 |
| Trna-leu | Not Available | Not Available | Positive | 2730088 - 2730172 | Not Available |
| cysteine synthase b | SAMN05444680_103703 | Not Available | Positive | 2730213 - 2731115 | 32433.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
