Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN05444680_103684 | Not Available | Negative | 2711158 - 2711394 | 8913.63 |
| zn-dependent protease with chaperone function | SAMN05444680_103685 | Not Available | Positive | 2711429 - 2713285 | 69903.3 |
| 16s rrna (cytosine967-c5)-methyltransferase | SAMN05444680_103686 | Not Available | Positive | 2713314 - 2714585 | 46783.2 |
| stearoyl-coa desaturase (delta-9 desaturase) | SAMN05444680_103687 | Not Available | Positive | 2714717 - 2715931 | 46038.7 |
| lsu ribosomal protein l33p | SAMN05444680_103688 | Not Available | Negative | 2716071 - 2716244 | 6547.1 |
| lsu ribosomal protein l28p | SAMN05444680_103689 | Not Available | Negative | 2716256 - 2716489 | 8779.65 |
| thioredoxin reductase (nadph) | SAMN05444680_103690 | Not Available | Negative | 2716776 - 2717726 | 34253.8 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN05444680_103691 | Not Available | Positive | 2717890 - 2718564 | 24955.5 |
| dna translocase ftsk | SAMN05444680_103692 | Not Available | Positive | 2718697 - 2721075 | 86742.6 |
| outer membrane lipoprotein carrier protein | SAMN05444680_103693 | Not Available | Positive | 2721104 - 2721742 | 22702.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
