Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadph2:quinone reductase | SAMN05444680_103674 | Not Available | Positive | 2698567 - 2699553 | 34924.3 |
| phosphate:na+ symporter | SAMN05444680_103675 | Not Available | Negative | 2699665 - 2701323 | 60008.9 |
| signal peptidase ii aspartic peptidase. merops family a08 | SAMN05444680_103676 | Not Available | Negative | 2701360 - 2701863 | 18423.7 |
| isoleucyl-trna synthetase | SAMN05444680_103677 | Not Available | Negative | 2701863 - 2704706 | 105642.0 |
| riboflavin kinase / fmn adenylyltransferase | SAMN05444680_103678 | Not Available | Negative | 2704818 - 2705759 | 33983.7 |
| hnh endonuclease | SAMN05444680_103679 | Not Available | Positive | 2706018 - 2706575 | 20932.3 |
| lipase (class 2) | SAMN05444680_103680 | Not Available | Negative | 2706579 - 2707913 | 48097.3 |
| hypothetical protein | SAMN05444680_103681 | Not Available | Negative | 2708045 - 2709160 | 40132.0 |
| hypothetical protein | SAMN05444680_103682 | Not Available | Negative | 2709185 - 2710366 | 43906.6 |
| phosphoribosylglycinamide formyltransferase-1 | SAMN05444680_103683 | Not Available | Positive | 2710510 - 2711100 | 21025.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
