Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444680_103664 | Not Available | Positive | 2688762 - 2688920 | 5760.08 |
| hypothetical protein | SAMN05444680_103665 | Not Available | Negative | 2688941 - 2689765 | 29788.2 |
| tripartite tricarboxylate transporter tctb family protein | SAMN05444680_103666 | Not Available | Positive | 2689923 - 2690411 | 17237.7 |
| tcta family transporter | SAMN05444680_103667 | Not Available | Positive | 2690422 - 2691939 | 53077.6 |
| dna-binding transcriptional regulator, lysr family | SAMN05444680_103668 | Not Available | Negative | 2692102 - 2693007 | 32807.3 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_103669 | Not Available | Positive | 2693120 - 2694088 | 34023.2 |
| gamma-glutamyltranspeptidase / glutathione hydrolase | SAMN05444680_103670 | Not Available | Positive | 2694224 - 2695837 | 57644.8 |
| eama-like transporter family protein | SAMN05444680_103671 | Not Available | Positive | 2695841 - 2696749 | 32254.8 |
| 3-oxoacyl-[acyl-carrier protein] reductase | SAMN05444680_103672 | Not Available | Positive | 2696766 - 2697563 | 27112.6 |
| permease of the drug/metabolite transporter (dmt) superfamily | SAMN05444680_103673 | Not Available | Negative | 2697567 - 2698466 | 32768.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
