Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ca-activated chloride channel family protein | SAMN05444680_103654 | Not Available | Negative | 2679018 - 2680058 | 37472.9 |
| protein of unknown function duf58 | SAMN05444680_103655 | Not Available | Negative | 2680055 - 2681047 | 37133.7 |
| moxr-like atpase | SAMN05444680_103656 | Not Available | Negative | 2681028 - 2682038 | 36980.0 |
| trypsin-like peptidase domain-containing protein | SAMN05444680_103657 | Not Available | Negative | 2682063 - 2683076 | 35153.0 |
| tatd dnase family protein | SAMN05444680_103658 | Not Available | Positive | 2683140 - 2684024 | 32198.7 |
| hypothetical protein | SAMN05444680_103659 | Not Available | Positive | 2684164 - 2684595 | 14772.2 |
| small conductance mechanosensitive channel | SAMN05444680_103660 | Not Available | Negative | 2684663 - 2685499 | 30005.8 |
| g/u mismatch-specific uracil-dna glycosylase | SAMN05444680_103661 | Not Available | Positive | 2685543 - 2686076 | 19815.6 |
| spermidine synthase | SAMN05444680_103662 | Not Available | Positive | 2686073 - 2686816 | 27743.5 |
| general secretion pathway protein e | SAMN05444680_103663 | Not Available | Positive | 2686838 - 2688622 | 65901.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
