Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dipeptidase e serine peptidase. merops family s51 | SAMN05444680_103644 | Not Available | Positive | 2668035 - 2668745 | 25653.9 |
| adenylate cyclase | SAMN05444680_103645 | Not Available | Positive | 2668820 - 2669860 | 37377.2 |
| exonuclease recj | SAMN05444680_103646 | Not Available | Negative | 2669900 - 2671609 | 61263.0 |
| hypothetical protein | SAMN05444680_103647 | Not Available | Negative | 2671612 - 2672583 | 33901.5 |
| lipoprotein-releasing system permease protein | SAMN05444680_103648 | Not Available | Positive | 2672619 - 2673875 | 45487.1 |
| lipoprotein-releasing system atp-binding protein | SAMN05444680_103649 | Not Available | Positive | 2673868 - 2674560 | 24771.0 |
| major facilitator superfamily protein | SAMN05444680_103650 | Not Available | Negative | 2674535 - 2676130 | 55998.3 |
| alkylhydroperoxidase ahpd family core domain-containing protein | SAMN05444680_103651 | Not Available | Negative | 2676140 - 2676580 | 16189.4 |
| gntr family transcriptional regulator / mocr family aminotransferase | SAMN05444680_103652 | Not Available | Positive | 2676678 - 2678126 | 52654.9 |
| 2-deoxy-d-gluconate 3-dehydrogenase | SAMN05444680_103653 | Not Available | Negative | 2678108 - 2678866 | 25537.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
