Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative addiction module antidote | SAMN05444680_103634 | Not Available | Positive | 2657904 - 2658131 | 8380.3 |
| death on curing protein | SAMN05444680_103635 | Not Available | Positive | 2658128 - 2658532 | 14375.8 |
| urease. metallo peptidase. merops family m38 | SAMN05444680_103636 | Not Available | Negative | 2658536 - 2660254 | 60890.9 |
| urease subunit beta | SAMN05444680_103637 | Not Available | Negative | 2660254 - 2660559 | 11050.2 |
| urease accessory protein | SAMN05444680_103638 | Not Available | Negative | 2660570 - 2661169 | 19896.8 |
| urease subunit gamma | SAMN05444680_103639 | Not Available | Negative | 2661307 - 2661609 | 10875.4 |
| signal transduction histidine kinase | SAMN05444680_103640 | Not Available | Positive | 2661654 - 2665187 | 128421.0 |
| two component transcriptional regulator, luxr family | SAMN05444680_103641 | Not Available | Positive | 2665184 - 2666197 | 36770.5 |
| hypothetical protein | SAMN05444680_103642 | Not Available | Positive | 2666261 - 2666929 | 24060.2 |
| hypothetical protein | SAMN05444680_103643 | Not Available | Positive | 2667231 - 2667788 | 20905.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
