Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, tetr family | SAMN05444680_103624 | Not Available | Positive | 2650580 - 2651248 | 24811.7 |
| Trna-ser | Not Available | Not Available | Positive | 2651288 - 2651375 | Not Available |
| hypothetical protein | SAMN05444680_103626 | Not Available | Positive | 2651806 - 2652105 | 10634.5 |
| protein of unknown function | SAMN05444680_103627 | Not Available | Positive | 2652269 - 2652571 | 10539.4 |
| dna-binding protein hu-beta | SAMN05444680_103628 | Not Available | Positive | 2652652 - 2653059 | 14123.6 |
| cd2+/zn2+-exporting atpase | SAMN05444680_103629 | Not Available | Negative | 2653119 - 2655374 | 78120.3 |
| protein of unknown function | SAMN05444680_103630 | Not Available | Negative | 2655450 - 2655704 | 9238.72 |
| urease accessory protein | SAMN05444680_103631 | Not Available | Negative | 2655833 - 2656483 | 23277.4 |
| urease accessory protein | SAMN05444680_103632 | Not Available | Negative | 2656546 - 2657235 | 24793.3 |
| urease accessory protein | SAMN05444680_103633 | Not Available | Negative | 2657235 - 2657831 | 21395.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
