Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna ligase (nad+) | SAMN05444680_101201 | Not Available | Positive | 209780 - 211867 | 76346.9 |
| hypothetical protein | SAMN05444680_101202 | Not Available | Positive | 211980 - 212303 | 11815.8 |
| hypothetical protein | SAMN05444680_101203 | Not Available | Positive | 212363 - 212623 | 9360.13 |
| peptide deformylase | SAMN05444680_101204 | Not Available | Positive | 212657 - 213196 | 19853.8 |
| putative oxidoreductase | SAMN05444680_101205 | Not Available | Negative | 213200 - 213607 | 13979.4 |
| amino acid abc transporter substrate-binding protein, paat family | SAMN05444680_101206 | Not Available | Positive | 213782 - 214813 | 37164.4 |
| general l-amino acid transport system permease protein | SAMN05444680_101207 | Not Available | Positive | 214810 - 215814 | 35810.2 |
| amino acid abc transporter membrane protein 2, paat family | SAMN05444680_101208 | Not Available | Positive | 215805 - 216881 | 39649.4 |
| hypothetical protein | SAMN05444680_101209 | Not Available | Negative | 216882 - 217277 | 13642.3 |
| utp--glnb (protein pii) uridylyltransferase, glnd | SAMN05444680_101210 | Not Available | Negative | 217453 - 220035 | 96621.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
