Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcription elongation factor greb | SAMN05444680_103614 | Not Available | Positive | 2641128 - 2641700 | 20884.4 |
| gtp pyrophosphokinase | SAMN05444680_103615 | Not Available | Negative | 2641714 - 2643969 | 83213.0 |
| dna-directed rna polymerase subunit omega | SAMN05444680_103616 | Not Available | Negative | 2644061 - 2644264 | 7417.27 |
| guanylate kinase | SAMN05444680_103617 | Not Available | Negative | 2644301 - 2644921 | 23062.5 |
| tigr00255 family protein | SAMN05444680_103618 | Not Available | Negative | 2644934 - 2645848 | 33586.2 |
| serine/threonine protein kinase | SAMN05444680_103619 | Not Available | Positive | 2645976 - 2646944 | 36264.0 |
| serine/threonine protein phosphatase prpc | SAMN05444680_103620 | Not Available | Positive | 2647024 - 2647929 | 32455.6 |
| rnase ph | SAMN05444680_103621 | Not Available | Positive | 2647959 - 2648687 | 25755.7 |
| xtp/ditp diphosphohydrolase | SAMN05444680_103622 | Not Available | Positive | 2648712 - 2649311 | 21245.4 |
| oxygen-independent coproporphyrinogen-3 oxidase | SAMN05444680_103623 | Not Available | Positive | 2649308 - 2650564 | 46047.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
