Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-(apurinic or apyrimidinic site) lyase | SAMN05444680_103604 | Not Available | Positive | 2631464 - 2632279 | 29430.7 |
| dynamin family protein | SAMN05444680_103605 | Not Available | Positive | 2632369 - 2634330 | 73163.6 |
| a/g-specific dna-adenine glycosylase | SAMN05444680_103606 | Not Available | Positive | 2634320 - 2635393 | 39459.2 |
| upf0042 nucleotide-binding protein | SAMN05444680_103607 | Not Available | Negative | 2635412 - 2636287 | 32532.0 |
| dna replication and repair protein recn | SAMN05444680_103608 | Not Available | Negative | 2636284 - 2637966 | 59730.6 |
| nad+ kinase | SAMN05444680_103609 | Not Available | Negative | 2637968 - 2638864 | 32005.4 |
| heat-inducible transcription repressor hrca | SAMN05444680_103610 | Not Available | Positive | 2638893 - 2639897 | 36776.3 |
| Trna-met | Not Available | Not Available | Positive | 2639937 - 2640013 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 2640114 - 2640190 | Not Available |
| hypothetical protein | SAMN05444680_103613 | Not Available | Negative | 2640288 - 2640455 | 5750.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
