Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxy-2-oxoheptanedioate aldolase | SAMN05444680_103584 | Not Available | Positive | 2613527 - 2614315 | 27832.3 |
| 2-hydroxy-3-oxopropionate reductase | SAMN05444680_103585 | Not Available | Positive | 2614330 - 2615208 | 30433.2 |
| hypothetical protein | SAMN05444680_103586 | Not Available | Negative | 2615211 - 2616551 | 48926.2 |
| 4-oxalocrotonate tautomerase | SAMN05444680_103587 | Not Available | Negative | 2616607 - 2617005 | 14640.4 |
| dna-binding transcriptional regulator, lysr family | SAMN05444680_103588 | Not Available | Positive | 2617113 - 2617982 | 31029.6 |
| aspartyl-trna(asn)/glutamyl-trna(gln) amidotransferase subunit a | SAMN05444680_103589 | Not Available | Negative | 2617992 - 2619401 | 50484.5 |
| peptide/nickel transport system substrate-binding protein | SAMN05444680_103590 | Not Available | Negative | 2619395 - 2620882 | 54046.7 |
| peptide/nickel transport system atp-binding protein | SAMN05444680_103591 | Not Available | Negative | 2620969 - 2621790 | 29818.1 |
| peptide/nickel transport system atp-binding protein | SAMN05444680_103592 | Not Available | Negative | 2621787 - 2622776 | 35480.4 |
| peptide/nickel transport system permease protein | SAMN05444680_103593 | Not Available | Negative | 2622784 - 2623665 | 30910.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
