Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphopantetheine adenylyltransferase | SAMN05444680_103574 | Not Available | Positive | 2604802 - 2605299 | 18213.1 |
| sensor histidine kinase inhibitor, kipi family | SAMN05444680_103575 | Not Available | Positive | 2605301 - 2605963 | 23334.1 |
| biotin-dependent carboxylase uncharacterized domain-containing protein | SAMN05444680_103576 | Not Available | Positive | 2605960 - 2606997 | 36952.6 |
| upf0271 protein | SAMN05444680_103577 | Not Available | Positive | 2606987 - 2607727 | 26045.1 |
| pyroglutamyl-peptidase | SAMN05444680_103578 | Not Available | Positive | 2607745 - 2608392 | 22927.7 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05444680_103579 | Not Available | Negative | 2608403 - 2609113 | 25851.7 |
| probable phosphoglycerate mutase | SAMN05444680_103580 | Not Available | Positive | 2609180 - 2609854 | 25259.1 |
| transcriptional regulator, laci family | SAMN05444680_103581 | Not Available | Positive | 2609896 - 2610939 | 36640.4 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_103582 | Not Available | Positive | 2611040 - 2612008 | 33578.4 |
| d-glucarate dehydratase | SAMN05444680_103583 | Not Available | Positive | 2612158 - 2613489 | 48922.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
