Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c oxidase assembly protein subunit 15 | SAMN05444680_103564 | Not Available | Positive | 2594726 - 2595907 | 42487.4 |
| protoheme ix farnesyltransferase | SAMN05444680_103565 | Not Available | Positive | 2595904 - 2596809 | 33110.4 |
| protein sco1/2 | SAMN05444680_103566 | Not Available | Positive | 2596806 - 2597432 | 22525.1 |
| 3-methyladenine dna glycosylase alkc | SAMN05444680_103567 | Not Available | Positive | 2597443 - 2598279 | 31672.8 |
| rna polymerase, sigma 32 subunit, rpoh | SAMN05444680_103568 | Not Available | Negative | 2598326 - 2599264 | 34607.4 |
| uncharacterized membrane protein ygl010w | SAMN05444680_103569 | Not Available | Negative | 2599400 - 2599861 | 16979.2 |
| fused signal recognition particle receptor | SAMN05444680_103570 | Not Available | Negative | 2599941 - 2601191 | 43408.0 |
| zinc protease | SAMN05444680_103571 | Not Available | Positive | 2601221 - 2602678 | 52920.0 |
| zinc protease | SAMN05444680_103572 | Not Available | Positive | 2602696 - 2604042 | 47991.5 |
| 16s rrna (guanine(966)-n(2))-methyltransferase rsmd | SAMN05444680_103573 | Not Available | Positive | 2604099 - 2604755 | 22830.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
