Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized membrane protein | SAMN05444680_103554 | Not Available | Positive | 2587617 - 2588093 | 17611.4 |
| cytochrome c oxidase subunit 2 | SAMN05444680_103555 | Not Available | Positive | 2588160 - 2589338 | 42836.6 |
| cytochrome c oxidase subunit 1 | SAMN05444680_103556 | Not Available | Positive | 2589380 - 2591017 | 60615.1 |
| hypothetical protein | SAMN05444680_103557 | Not Available | Positive | 2591031 - 2591141 | 4223.42 |
| cytochrome c oxidase assembly protein subunit 11 | SAMN05444680_103558 | Not Available | Positive | 2591152 - 2591781 | 23148.9 |
| protein of unknown function | SAMN05444680_103559 | Not Available | Positive | 2591778 - 2591990 | 7649.5 |
| cytochrome c oxidase subunit 3 | SAMN05444680_103560 | Not Available | Positive | 2592043 - 2592924 | 33122.3 |
| protein of unknown function | SAMN05444680_103561 | Not Available | Negative | 2592996 - 2593226 | 8096.45 |
| cytochrome oxidase assembly protein shyy1 | SAMN05444680_103562 | Not Available | Positive | 2593320 - 2594051 | 26747.1 |
| hypothetical protein | SAMN05444680_103563 | Not Available | Positive | 2593993 - 2594718 | 26505.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
