Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trans-feruloyl-coa synthase | SAMN05444680_103544 | Not Available | Negative | 2577765 - 2579651 | 68515.9 |
| vanillin synthase /trans-feruloyl-coa hydratase | SAMN05444680_103545 | Not Available | Negative | 2579669 - 2580442 | 27383.0 |
| hypothetical protein | SAMN05444680_103546 | Not Available | Positive | 2580558 - 2581427 | 33197.6 |
| kef-type potassium/proton antiporter, cpa2 family | SAMN05444680_103547 | Not Available | Negative | 2581551 - 2583380 | 66326.4 |
| kef-type potassium/proton antiporter accessory protein, cpa2 family | SAMN05444680_103548 | Not Available | Negative | 2583383 - 2584057 | 25345.0 |
| chromosome partitioning protein | SAMN05444680_103549 | Not Available | Positive | 2584089 - 2584709 | 22869.6 |
| acyl dehydratase | SAMN05444680_103550 | Not Available | Positive | 2584888 - 2585346 | 16550.0 |
| trna (cytidine/uridine-2'-o-)-methyltransferase | SAMN05444680_103551 | Not Available | Negative | 2585351 - 2585812 | 17266.8 |
| comf family protein | SAMN05444680_103552 | Not Available | Negative | 2585842 - 2586417 | 20483.0 |
| malonyl-coa o-methyltransferase | SAMN05444680_103553 | Not Available | Positive | 2586581 - 2587495 | 33883.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
