Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfate transport system atp-binding protein | SAMN05444680_101191 | Not Available | Positive | 197606 - 198700 | 40520.5 |
| disulfide bond formation protein dsbb | SAMN05444680_101192 | Not Available | Positive | 198763 - 199197 | 15889.0 |
| arac-type dna-binding protein | SAMN05444680_101193 | Not Available | Positive | 199449 - 200504 | 38763.9 |
| regulatory helix-turn-helix protein, lysr family | SAMN05444680_101194 | Not Available | Negative | 200549 - 200923 | 13678.3 |
| outer membrane protein (porin) | SAMN05444680_101195 | Not Available | Negative | 201042 - 202337 | 45557.9 |
| hypothetical protein | SAMN05444680_101196 | Not Available | Negative | 202600 - 203292 | 25398.0 |
| pgap1-like protein | SAMN05444680_101197 | Not Available | Negative | 203357 - 204652 | 47610.1 |
| hypothetical protein | SAMN05444680_101198 | Not Available | Negative | 204663 - 204983 | 11873.4 |
| condensin subunit smc | SAMN05444680_101199 | Not Available | Positive | 205089 - 208604 | 130410.0 |
| zipa, c-terminal ftsz-binding domain | SAMN05444680_101200 | Not Available | Positive | 208660 - 209757 | 38918.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
